ytlA [2018-05-04 16:10:34]

similar to ABC transporter (binding protein)

locus: BSU30595

pI: 5.00

mw: 38.00 kDa

protein length: 334 aa

gene length: 1002 bp

function: unknown

product: putative ABC transporter (binding protein)

essential: no

synonyms

Genomic Context

categories

• [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.4|Unknown ABC transporters]
• [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]
• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

Gene

Coordinates: 3,132,370 → 3,133,374

Expression and Regulation

Operons

• genes: [gene|56E482D9CAC6E350140FD21A1C4AC8820B918CDA|ytlA]-[gene|3DC6A032B0F076A460FE2C3244D747CFC7583FE7|ytlC]-[gene|2768A088A2902FA776CB656F29A6F4B0C9E69CA7|ytlD]
  description: [Pubmed|9387221]

  sigma factors

  • [protein|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK]: sigma factor, [Pubmed|15699190,15383836], in [regulon|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK regulon]

  regulation

  • expressed late during sporulation in the mother cell ([protein|search|SigK]) [Pubmed|15699190,15383836]

Biological materials

Mutant

• MGNA-A301 (ytlA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/301 NBRP B. subtilis, Japan]
• BKE30595 (Δ[gene|56E482D9CAC6E350140FD21A1C4AC8820B918CDA|ytlA]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE30595 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACATAGACAACCTCCTTAT, downstream forward: _UP4_TCGGAGAAATAGGAGGCGCC
• BKK30595 (Δ[gene|56E482D9CAC6E350140FD21A1C4AC8820B918CDA|ytlA]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK30595 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACATAGACAACCTCCTTAT, downstream forward: _UP4_TCGGAGAAATAGGAGGCGCC

References

• 10092453,9387221,15699190,15383836